>AY396478.1_Pogonatum_macrophyllum_Pogonatum_macrophyllum_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTATGAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------GAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----T-TTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTAGGAAAATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AAAA --AAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAGTTT-TGAATAATA-AA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTCACCAG------- >GU569706.1_Pogonatum_cirratum_Pogonatum_cirratum_voucher_H_Bell_31.07.07_#6_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__compl --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----T-TTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTGTTTAGGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AAAA --A--ATAAATTTT-------------ATTTTTATTGACATAAGTTCAAATTTTATGTTA CGATTATTT-TGAATAATA-AA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569721.1_Pogonatum_usambaricum_Pogonatum_usambaricum_voucher_H_Hedderson_16241_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__ --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569704.1_Pogonatum_belangeri_Pogonatum_belangeri_voucher_H_Hedderson_16289_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__comp --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569718.1_Pogonatum_subulatum_Pogonatum_subulatum_voucher_H_Streimann_58707_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__comp --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAAGAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >AY396488.1_Pogonatum_gracilifolium_Pogonatum_gracilifolium_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTCTTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCC------------------- >KP901295.1_Pogonatum_sinense_Pogonatum_sinense_isolate_N455_conatins_tRNA-Leu__trnL___trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. -------------------ACGCTACGGACTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAA TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA TAAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569714.1_Pogonatum_nipponicum_Pogonatum_nipponicum_voucher_H_Hayashi_7038_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__compl --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTC-------------GAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAA TTTTA-CATG------TTAGTTCTAACAGC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAATAAATGTC-------------ATTTTTATTGACATAAGTTTAATTTTTATGTTA CGATAATTT-TGAATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569703.1_Pogonatum_aloides_Pogonatum_aloides_voucher_H_Bell_04.01.07_#1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complet --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAGATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTAGAAAGATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAT---TATATATA------------------AGAA -GAAAATAAATGTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGT--------------- >AY396484.1_Pogonatum_nanum_Pogonatum_nanum_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAGTCTT---AT-TTT-------------AAGATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATTCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTAGAAAGATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAT---TATATATA------------------AGAA -GAAAATAAATGTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTC------------ >AF545025.1_Pogonatum_pensilvanicum_Pogonatum_pensilvanicum_voucher_Hyvonen_6393_tRNA-Leu_gene__partial_sequence__trnL-trnF_intergenic_spacer__complete -----------------TAGCGCTACGGACTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAAT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------GAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----AATTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAGT---TATATATA------------------AGAA -AAAAATAAATGTC-------------ATTTTTATTGACATAAGTTCAAATTTTATGTTA CGATAATTT-TGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTC----------------- >GU569708.1_Pogonatum_convolutum_Pogonatum_convolutum_voucher_H_Hedderson_16265_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__co --------------------------------------GAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAAT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAGATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTGTTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAGAAGT---TATATATA------------------AGAA -AAAAATAAATATC-------------ATTTTT--------------------------- ------------AATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569690.1_Notoligotrichum_minimum_Notoligotrichum_minimum_voucher_H_Bell_1581_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__co --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------TTAATTTATTT TTTTAATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569684.1_Notoligotrichum_angulatum_Notoligotrichum_angulatum_voucher_H_Bell_1630_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------TTAATTTATTT TTTTAATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569669.1_Atrichopsis_compressa_Atrichopsis_compressa_voucher_H_Bell_1615_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__comple --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------TTAATTTATTT TTTTAATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTCTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569689.1_Notoligotrichum_crispulum_Notoligotrichum_crispulum_voucher_H_Bell_02.03.08_#2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------TTAATTTATTT TTTTAATTAAATTATTTATGAGAATTT--------AGACGAGGATAAAGATAGAGTCCGG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569688.1_Notoligotrichum_bellii_Notoligotrichum_bellii_voucher_H_Bell_03.03.08_#1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_space --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------TTAATTTATTT TTTTAATTAAATTATTTATGAGAATTT--------AGACGAGGATAAAGATAGAGTCCGG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569686.1_Notoligotrichum_australe_Notoligotrichum_australe_voucher_H_Bell_12.03.08_#3_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_s --------------------------------------TAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------T-AATTTATTT TTTTAATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA GAAAAATAAATTTA-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAACAAAAAAAGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569709.1_Pogonatum_dentatum_Pogonatum_dentatum_voucher_H_Bell_10.09.05_#2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__compl --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------T---------- ----AATTAAATTATTTATGAGAATTT--------AAACAAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTGTTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AAAA --AAAATAAATTTC-------------ATTTTTATTGACATAAATTTAATTTTTATGTTA CGATGATTT-TGAATAATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCG---------------- >KP901293.1_Delongia_glacialis_Polytrichaceae_sp._NEB-2015b_isolate_N522_conatins_tRNA-Leu__trnL___trnL-trnF_intergenic_spacer__partial_sequence__chlor ---------------------GCTACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-TTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-CTATT -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATRAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------T---------- ---TAATTAAATTATTTATGATAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA TGATAACTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGT--------------- >GU569712.1_Pogonatum_microstomum_Pogonatum_microstomum_voucher_H_Shevock_22895_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__co --------------------------------------TAGATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGG-ATATA -GGTAA----TCCTGAGCCAAATCTT---ATATCT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAAATTT--------GAACGAGGATAAAGGTAGAGTCCAA TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTATC----------CCCAAAAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA TGATAATTT-TGAATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569705.1_Pogonatum_campylocarpon_Pogonatum_campylocarpon_voucher_H_Hyvonen_06392_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer --------------------------------------TAGATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGG-ATATA -GGTAA----TCCTGAGCCAAATCTT---ATTTCT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTTATGAAAATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTATC----------CCCAAAAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA TGATAATTT-TGAATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >AY396491.1_Pogonatum_neglectum_Pogonatum_neglectum_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTAGAAAATAGATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGG-ATATA -GGTAA----TCCTGAGCCAAATCTT---ATTTCT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAAATTATTT---------T--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTATC----------CCCAAAAAGT---TATATATA------------------AGAA -AAAAATAAATTTC-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA TGATAATTT-TGAATGATAAAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTCACCAGTTCAA-- >GU569699.1_Oligotrichum_obtusatum_Oligotrichum_obtusatum_voucher_H_Hyvonen_3469_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__c --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAATTT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569696.1_Oligotrichum_austroaligerum_Oligotrichum_austroaligerum_voucher_H_Bell_1629_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_sp --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569701.1_Oligotrichum_suzukii_Oligotrichum_suzukii_voucher_H_Hyvonen_3985_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__compl --------------------------------------TAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGT--------------- >JQ639413.1_Oligotrichum_aligerum_Oligotrichum_aligerum_isolate_N477_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ -------------------ACGCTACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAATTT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCG---------------- >AF545015.1_Oligotrichum_parallelum_Oligotrichum_parallelum_voucher_Hedderson_10043_tRNA-Leu_gene__partial_sequence__trnL-trnF_intergenic_spacer__compl --------------------CGCTACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTCTAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTTTAACAAC----AATT---------------------- ---GAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAAGAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTCACC--------- >JQ639417.1_Oligotrichum_falcifolium_Oligotrichum_falcifolium_isolate_N478_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complet -------------------ACGCTACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATAAGAAAT -----AAGAAAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >JQ639418.1_Oligotrichum_javanicum_Oligotrichum_javanicum_isolate_N497_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_se ---------------------GCTACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATAAGAAAT -----AAGAAAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----AATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCG---------------- >JQ639416.1_Oligotrichum_falcatum_Oligotrichum_falcatum_isolate_N476_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ -----------------------TACGGACTTGGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ -------------------------------------------------T---------- --TTAATTAAATTATTTATAAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT---TATATATA------------------AGAA --AAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >GU569713.1_Pogonatum_neesii_Pogonatum_neesii_voucher_H_Shevock_22891_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_seq --------------------------------------TAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAT- -----GAGAAAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AATTAACTTATTTATGAAGATTT--------GAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAGC----AATT---------------------- ---AAAATTGCGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAAAAAT---TCTATATA------------------ACAA ------AAATTTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTTCTGAATGATAGAA--AGCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGT------------- >AY396497.1_Pogonatum_brachyphyllum_Pogonatum_brachyphyllum_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTAGAAAAAAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGTTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-CTT-------------AAAATAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAGTT---------- -----TT----------------------------------------------------- ------------------------------------------------------------ ----------ATTATTTATGAAAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAT---TATAAATA-------------------AGA AAAAAATAAATGTC-------------ATTTTTATTAACATAAGTTCAAATTTTATGTTC AAATAATTTCTGAATAATAGAA---GCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTCACCAGTTCAAAT >AY396490.1_Pogonatum_proliferum_Pogonatum_proliferum_tRNA-Leu_gene_and_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. --------------GGTAGACGCTACGGACTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATT---------- -----TTTTTT------------------------------------------------- ------------------------------------------------------------ ----AAATAAATTATTTATGAATATTT--------AAACGAGGATAAAGGTAGAGTCCAA TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAATCC CTCTACC----------CCCAAAAAGT---TATATATA------------------TATA TATAAAAAAATATA-------------ATTTTTAATGATA-------------------- ------------------AAAA---GCCGGGATAGCTCAGTGGTAGAGCAGAGGACTGAA AATCCTCGTGTCACCA-------- >AF478318.1_Pogonatum_perichaetiale_Pogonatum_perichaetiale_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. -----------ATCGGTAGACGCTACGGACTTAGAAAA-AAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAAT-ATATA -GGTAA----TCCTGAGCCAAATCTT---GT-TAT-------------AAAACGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTTT------------------------------------------------ ------------------------------------------------------------ ----GATTAAATTATTTATAAAAATTT--------AAACAAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTA------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >KP342482.1_Polytrichum_densifolium_Polytrichastrum_formosum_var._densifolium_isolate_719_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_ ------------------------------------------------------------ ----------------------------------------------------AT-ATATA -GGTAA----TCCTGAGCCAWWTCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATTTATTTTTTTTTTTATTTAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAATAAAAAATTT-AACTATTTTTT T---AATTAAATTATTTATGAAAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAAAA-TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGGATAGCTC---------------------- ------------------------ >KP342480.1_Polytrichum_formosum_Polytrichastrum_formosum_isolate_722_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_seq ------------------------------------------------------------ ----------------------------------------------------AT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATTTATTTTTTTT--TATTTAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAATAAAAAATTT-AACTATTTTTT T---AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAAAA-TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGGATAGCTCCC-------------------- ------------------------ >KP342470.1_Polytrichum_pallidisetum_Polytrichastrum_pallidisetum_isolate_714_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__comp ------------------------------------------------------------ ---------------------------TTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATTTATTTTTTTT--TATTCAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAATAAAAAATTT-AACTATTTTTT T---AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAAAA-TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGGATAGCTC---------------------- ------------------------ >KP342473.1_Polytrichum_longisetum_var._anomalum_Polytrichastrum_longisetum_var._anomalum_isolate_723_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF ------------------------------------------------------------ ---------------------------CTCA-GGGAAACCCAGGTTGAAAAAAT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATTTATTTTTTTT--TATTTAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAATAAAAAATTT-AACTATTTTTT T---AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTTTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAA---TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGGATAGCTC---------------------- ------------------------ >MF180578.1_Polytrichum_strictum_Polytrichum_strictum_voucher_BR_282760051_tRNA-Leu__trnL__gene__trnL-trnF_intergenic_spacer__and_tRNA-Phe__trnF__ ------------------------------------------------------------ -------------GTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAAT--TTTTTT-TA ATTTATTTTTTTTT-TATTTAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAATAAAAAATTT-AACTATTTTTT TT--AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAAA--CAAATTTC-------------ATTTTTATTGACATAAGTTTAATTTTTATGTTA CGATAATT---------------------------------------------------- ------------------------ >MF180613.1_Polytrichum_piliferum_Polytrichum_piliferum_voucher_BR_282801464_tRNA-Leu__trnL__gene__trnL-trnF_intergenic_spacer__and_tRNA-Phe__trnF ------------------------------------------------------------ -------------GTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA-TTTTTT-TA ATTGATTTT------------ATTTATTAATAATTAAAATTAATTAATATTTTTATT--- -------------CTATCAACTAAAAATCTTTAATTAATAAAAAATTTTAACTATTTTTT TT--AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AA----TAAATGTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGG----------------------------- ------------------------ >KM381992.1_Polytrichastrum_septentrionale_Polytrichastrum_alpinum_var._septentrionale_voucher_6_Aug_1987__Volotovsky__SASY__tRNA-Leu_gene__partial_seq ------------------------------------------------------------ AA-CTTACTAAGTGTTAGCTTTCAG-ATTCACGGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTT------------TTTATTAATAATTGAAATCAATTAATATTTTTATT--- -------------TTATCAATTAAAATGCTTTAATTAATAAAAAATTA-AATTATTTTTT TTTTAATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-AATATATAAG------------------AAAA AAA---TAAATTTC-------------ATTTTTATTGACATAAGTTCAATT--------- ------------------------------------------------------------ ------------------------ >KM381987.1_Polytrichastrum_papillatum_Polytrichastrum_papillatum_voucher_19_July_1989_Afonina__LE__tRNA-Leu_gene__partial_sequence__trnL-trnF_intergen ------------------------------------------------------------ AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TTT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTT------------TTTATTAATAATTGAAATCAATTAATATTTTTATT--- -------------TTATCAATTAAAATGCTTTAATTAATAAAAAATTA-AATTATTTTTT TTTTAATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-AATATATAAG------------------AAAA AAA---TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TTAATAATAAAAA-AGCCGGGA---------------------------- ------------------------ >KM381977.1_Polytrichastrum_alpinum_Polytrichastrum_alpinum_voucher_Ignatov_11-4198__MHA__tRNA-Leu_gene__partial_sequence__trnL-trnF_intergenic_spacer_ ------------------------------------------------------------ -------CTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTT------------TT-ATTAATAATTGAAATCAATTAATATTTTTATT--- -------------TTATCAATTAAAATGCTTTAATTAATAAAAAATTA-AATTATTTTTT TT--AATTAAATTATTTATGAGAATTT--------AAACAAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-AATATATAAG------------------AAAA AAA---TAAATTTC-------------ATTTTTATTGACATAAGTTCAATCTTTATGTTA CGATAATTT-TTAATAATAAAAA-AGCCGGGATAGCTC---------------------- ------------------------ >MF180559.1_Polytrichum_juniperinum_Polytrichum_juniperinum_voucher_AAS_297_tRNA-Leu__trnL__gene__trnL-trnF_intergenic_spacer__and_tRNA-Phe__trnF__gene ------------------------------------------------------------ -------------GTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAAT----------- -----TTTT--------------------------------------------------- -----------------------------TTTAGTTAA---------------ATTTTTT TT--AATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATT-TATATATAAT------------------AAAA AAAAAACAAATTTC-------------ATTTTTATTGACATAAGTTTAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGG----------------------------- ------------------------ >KM381995.1_Polytrichastrum_sphaerothecium_Polytrichastrum_sphaerothecium_voucher_3_Aug_1990__Czernyadjeva_s.n.__LE__tRNA-Leu_gene__partial_sequence__t ------------------------------------------------------------ AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAAGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---GT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTT-------------------------------------------------- -----------------------------TTTAATT----------------TATTTTTT TT--ATTTAAATTATTTATGATAATTT--------AAACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTATC----------CCCAAAAATT-CATATATAAN------------------AAAA AAA---TAAATTTC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA-AGCCGGGATAGCTC---------------------- ------------------------ >KM381958.1_Pogonatum_urnigerum_Pogonatum_urnigerum_voucher_1984_Czernyadjeva_s.n.__LE__tRNA-Leu_gene__partial_sequence__trnL-trnF_intergenic_spacer__c ------------------------------------------------------------ AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA---------- -----TTTTTT-------------------TAATT--------TTTTTTTTTTTTTA--- -------------CTAATAATTAAAATGTTTTAATTAAAAAAAATTAA-----ATTTTTT TT--AATTTAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAT-TATATA------------------------AA AA----------TC-------------ATTTTTATTGACATAAGTTCAATTTTTATGTTA CGATAATTT-TGAATAATAAAAA--GCCGGGATAGCTC---------------------- ------------------------ >KP881795.1_Atrichum_altecristatum_Atrichum_altecristatum_isolate_DP14.1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_ ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AATTTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAATTTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAAAATATATAT--------------------AAG AAAAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAAATTTA----- ------------------------------------------------------------ ------------------------ >KP881779.1_Atrichum_flavisetum_Atrichum_flavisetum_isolate_27334.3_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_seque ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AATTTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAATTTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAATATATATAT--------------------AAG AAAAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAAATTTTA----- ------------------------------------------------------------ ------------------------ >KP881814.1_Atrichum_angustatum_Atrichum_angustatum_isolate_DP20.3_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequen ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AATTTAAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATATTTTAATGAA-TAAAAAATTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAATATATATAT--------------------AAG AAAAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAATTTTTA----- ------------------------------------------------------------ ------------------------ >KP881791.1_Atrichum_crispulum_Atrichum_crispulum_isolate_Bag22.2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AAATTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAAATTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAAAATATAT----------------------AAG AAAAAATAAATTTT-------------ATTTTTATGGACATAAGTTCAAATTTTA----- ------------------------------------------------------------ ------------------------ >KP881804.1_Atrichum_undulatum_Atrichum_undulatum_isolate_DP88.1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AAATTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAAATTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAATATATATATA------------------TAAG AAAAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAATTTTTA----- ------------------------------------------------------------ ------------------------ >KP881812.1_Atrichum_crispum_Atrichum_crispum_isolate_HD25_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_ ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAA-GT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AAATTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTA---------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAAATTTAACTATTTTTT ----AATTAAATTTTTTATGAAAATTT--------GAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAAATATATATATA------------------TAAG AAAAAATAAATTTT-------------ATTTTTATTGACATAAGTTCAATTTTTA----- ------------------------------------------------------------ ------------------------ >KP881806.1_Atrichum_selwynii_Atrichum_selwynii_isolate_DP77.1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__ ------------------------------------------------------------ ---------------------------TTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCC-------------AAATTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTA ATCTATTTTTTTT--------ATTTATTAATAATTGAAATTAATTAATATTTTTATTATT TTAATTAAAATTTCTATTAATTAAAAT-CTTTAATGAA-TAAAAAATTTAACTATTTTTT ----AATTAAATTATTTATGAAAATTT--------AAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AGAATTGTGGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAAA-TATATATAT--------------------AAG AAAAAATAATTTTT-------------ATTTTTATTGACATAAGTTCAATTTTTA----- ------------------------------------------------------------ ------------------------ >AF478316.1_Polytrichadelphus_aristatus_Polytrichadelphus_aristatus_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. -----------ATCGGTAGACGCTACGGACTTAAAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTT----A AGTTATTTTTTG---------ATTTACTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATTAATTAAAGCAGTTTAATTAA-AAAAAAAATAGTTAAATTTTT TATTAATTAAATTATTTATAAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAGC----AATT---------------------- ---AAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACC---------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF283483.1_Polytrichadelphus_umbrosus_Polytrichadelphus_umbrosus_tRNA-Leu__trnL__gene__intron__chloroplast_gene_for_chloroplast_product. -----------------------------------AAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTT----A AGTTATTTTTTG---------ATTTACTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATTAATTAAAGCAGTTTAATTAA-AAAAAAAATAGTTAAATTTTT TATTAATTAAATTATTTCTAAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAGC----AATT---------------------- ---AAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF283482.1_Polytrichadelphus_longisetus_Polytrichadelphus_longisetus_tRNA-Leu__trnL__gene__intron__chloroplast_gene_for_chloroplast_product. -----------------------------------AAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTT----A AGTTATTTTTTG---------ATTTACTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATTAATTAAAGCAGTTTAATTAA-AAAAAAATTTAACTATTTTTT T--TAATTAAATTATTTATAAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAGC----AATT---------------------- ---AAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF283481.1_Polytrichadelphus_magellanicus_Polytrichadelphus_magellanicus_CHI2_tRNA-Leu__trnL__gene__intron__chloroplast_gene_for_chloroplast_product. -----------------------------------AAATAAATTG-AGCTTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTTTTTA AGTTATTTTTTG---------ATTTACTAATAATTGAAATCAATTAATATTTTTATT--- -------------CTATTAATTAATATGCTTTAATTAA-TAAAAAATTTAACTATTTTTT T----ATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTAGTAAANAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AY028986.1_Dendroligotrichum_dendroides_Dendroligotrichum_dendroides_isolate_98-Mo_10*_tRNA-Leu__trnL__gene__intron__chloroplast_gene_for_chloroplast_ -----------------------------------AAATAAATTG-A-CCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTT--GA ATTTATTTTTT------------TTACTAATAATTGAAATTAATTAATATTTTTATT--- -------------CTATTAATTAAAATGCTTTAATTAATAAAAAAAATAATTAAATTTTT TATTAATTAAAAATTTTATGAGAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF418307.1_Atrichum_tenellum_Atrichum_tenellum_chloroplast_tRNA-Leu__trnL__gene__intron_sequence. --------------------------------GAAAAAGAAATTG-AGCTTTAGTAGAAA AA-TTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATTTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTC---AT-TCC-------------AAATTGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATCTATTTTTTT---------AAATATTAATAATTGAAATTAATTAATATTTTTATTAAT TTAATTAAAATTTCTATTAATTAAAATACTTTAATGAA-TAAAAAATTTAACTATTTTTT T---AATTAAATTATTTATGAAAATTT--------AAACGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAACAAC----AATG---------------------- ---AAAATTGTGGTAGAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478319.1_Notoligotrichum_trichodon_Notoligotrichum_trichodon_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. --------CGAATCGGTAGACGCTACGGACTTGGAAAATAAGTTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAATCTAGGTTGAAAAAGT-ATATA -GATAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTT-TA ATTTATTTTTTT---------ATTTACTAATAATTGAAATTAATTAATATTTTTATT--- -------------CTATTAATTAAAATGTTTTAATTAATAAAAAAATTTAACTATTTTTT T---AATTAAATTATTTATGAAAATTT--------AGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTT------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >HE993665.1_Polytrichum_hyperboreum_Polytrichum_hyperboreum_chloroplast_tRNA-Leu_gene_intron__isolate_BCB_601_TRH. ---------------------------GACTTAAAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTA- ATTGATTTT------------ATTTATTAATAATTAAAATCAATTAACATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAA-TAAAAAATTTTAACTATTTTT T--TAATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGG---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478317.1_Polytrichum_commune_Polytrichum_commune_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ----------CGAAACGGAGACGCTACGGCTTAGAAAATAAATTG-AGCCTTAGTAGAAA AA-CTTACTAAGTGTTAGCTTTCAG-ATTCA-GGGAAACCCAGGTTGAAAAAGT-ATATA -GGTAA----TCCTGAGCCAAATCTT---AT-TCT-------------AAAATGAGAAA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATATTTTTTTTTT ATTTATTTTTTTTA---TTTAATTTATTAATAATTAAAATCAATTAATATTTTTATT--- -------------CTATCAATTAAAAATCTTTAATTAA-TAAAAAATTTAACTATTTTTT T--TAATTAAATTATTTATGAGAATTT--------AAACGAGGATAAAGGTAGAGTCCAG TTTTA-CATG------TTAGTTCTAACAAC----AATT---------------------- ---AAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTG-CCGTGAGGGTTCAAGTCC CTCTAT------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >LN828225.1_Tetrodontium_brownianum_Tetrodontium_brownianum_chloroplast_trnL_gene_intron__isolate_GBoL1541. -----------------------------------AATCAATT-G-AGCCTCAGTAGAAA AA-CTTACTAAGTGCTAGCTTTCAG-ATTCA-GGGAAACCTAGGTTGAAAAAA--ATATA -GGCAA----TCCTGAGCCAAATCTC---ATTTC-------------AAAAGTAAGATA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATATTAA------TTT TTTAGTTTGTTA------------------------------------------------ -----------------------------------------------------ATAGAAG TAAAAATTGAATGATAATTCATTTTTTT-----CTATTTATCGAAAAAGATATATTTGAA AATTC-AATAAAAGATCTAATTTCATTAATTAAAAAAA---------------------- ---TAAACAACGATAAAAA-ATAA-TAATTTA---TTTA-AATTAAAAAAGAGTAAATTA CTCTATC----------AATAAATTTATGCCTTATCAA-----------------TTGGA CGAGGATAGAGATA-------------GAGTCCAATTGAACGAAGTAATTTTAACGACAA TTTT--AATTGTAGTAAAAAG--------------------------------------- ------------------------ >AY050278.1_Andreaea_rupestris_Andreaea_rupestris_tRNA-Leu__trnL__gene__intron__chloroplast_gene_for_chloroplast_product. -----------------------------------ATTAATTT-G-AGCCTTAGTAAAAA AA-CTTACTAAGTGCTAGCTTTCAG-ATTCA-GGGAAACCTAAGTTGAAAAAA--ATATA -GGCAA----TCCTGAGCCAAATCCT---ATTTCTCGG----AAATAAGAAATAAGATA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATAT------TCT TTTAATTTTATA------------------------------------------------ -----------------------------------------------------GTTTATT TGTA---TAAATGAAAATAAATTATT---------GGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAA-G--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478296.1_Tetraphis_geniculata_Tetraphis_geniculata_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. --------------ATCGGTAGACGCTACGGACTTGATCAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAGTGCTAGCTTTCAG-ATTCA-GGGAAACCTAGGCTGAAAAAA--ATATA -GGTAA----TCCTGAGCCAAATCTC---ATTTAATGA----AA---ATGAATAAGATA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATA------------- ----ATTTTTTG------------------------------------------------ -----------------------------------------------------ATAGAAA GAAGAA-TAAATTGTAATTAATTTTTTT-------ATTTA-CTAAAAAATTATATTTTAA AATAA-AATAA-----TTTATTTTTCTAATT---TAAA---------------------- ---TAAATTATTTTAACAATAAAA-TGATCTA---TTAATAATTAGACGAGGATAAAG-A TAGAGTC------------CAGTTTTACATGCTAATTC-----------------TAGTA ACAATTTAAATTGT-------------AGTAAAAAGAAAATCCGTTGGCTTTATTGACCG TGAG--GGTTCAAGTCCC------------------------------------------ ------------------------ >AF478293.1_Andreaea_nitida_Andreaea_nitida_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ----------------------------------TTGTTAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAGTGCTAGCTTTCAG-ATTCA-GGGAAACCTAAGTTGAAAAAA--ATATA -GGCAA----TCCTGAGCCAAATCCT---ATTTCTC-----------GGAAATAAGATA- -----------GGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATA------TTCT TTTCATTTTATA------------------------------------------------ -----------------------------------------------------GTTTATT TGTA---TAAATGAAAATAAATTATT---------GGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAG-------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AY608120.1_Andreaea_rothii_Andreaea_rothii_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_tRNA-Phe__trnF_ ----------------------------------------------AGCCTTAGTAGAAA AA-CTTACTAAGTGCTAGCTTTCAG-ATTCA-GGGAAACCTAAGTTGAAAAAA--ATATA -GGCAA----TCCTGAGCCAAATCCT---ATTTTTC-----------GGAAATAGGATA- -----------GGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATAATA---TTCT TTTAATTTTATA------------------------------------------------ -----------------------------------------------------GTTTATT TGTA---TAAATAAAAATAAATTATT---------GGACGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TGAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAATTTTCTTTATTAAAATT-------------TTATT ATTCAACAAAAAAA-------------AGTGTTACTATAACTTTATAAATTAATTTTTTA TTTTTTAACTATATTAAACTAATTTTTTTAACTATATTAAACTAATATAATTAAAAAAAA ------------------------ >KJ651069.1_Dicranum_acutifolium_Dicranum_acutifolium_isolate_Dic_1660_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_se -----------------------------------AAATAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATAAA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAGTAAAAGATAA AAAGAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ796586.1_Dicranum_septentrionale_Dicranum_septentrionale_isolate_S1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_se -----------------------------------AAATAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATAGA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAGGATAGCCCGAGTAAAAGATAA AA-GAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651103.1_Dicranum_scottianum_Dicranum_scottianum_isolate_PT_3_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACCTAGGTCGAAAAAA--GTATA -GGCAA----TCCCGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGACAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---CAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATCCTTTTCT-------------------AT TGACACAAGCTTCA-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502751.1_Dicranum_canariense_Dicranum_canariense_isolate_Dcan3_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACCTAGGTCGAAAAAA--GTATA -GGCAA----TCCCGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGACAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---CAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATCCTTTTCT-------------------AT TGACACAAGCTTCA-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ796580.1_Dicranum_fuscescens_Dicranum_fuscescens_isolate_FU2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence_ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGTAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCA-------------GGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ796603.1_Dicranum_undulatum_Dicranum_undulatum_isolate_SE_36_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence_ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCA-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KY296867.1_Dicranum_elongatum_Dicranum_elongatum_isolate_301_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__a -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTG------- ------------------------ >AF435343.1_Orthodicranum_flagellare_Orthodicranum_flagellare_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comp -----------------------------------AAATGATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------TATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAATAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >KM502757.1_Dicranum_flagellare_Dicranum_flagellare_isolate_Dfla1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATGATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------TATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAATAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502780.1_Dicranum_viride_Dicranum_viride_isolate_CH_4_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_tR -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KT580708.1_Dicranum_schljakovii_Dicranum_schljakovii_voucher_13.VII.2003__O.Anenkhonov__#Op.Ku-42 -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651088.1_Dicranum_tauricum_Dicranum_tauricum_isolate_Dta_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAACGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATCTTTTTCT-------------------AT TGACACAATCTTCG-------------GGTTTATGTTAAGATAGCCCAAATAATAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >AF435312.1_Chorisodontium_setaceum_Chorisodontium_setaceum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comple -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----GTT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >AF435311.1_Chorisodontium_mittenii_Chorisodontium_mittenii_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comple -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----GTT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >KJ651087.1_Dicranum_majus_Dicranum_majus_isolate_Dspa_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_tRNA -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTGTA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTGAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KF423922.1_Dicranum_bonjeanii_Dicranum_bonjeanii_isolate_Attu_1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTGTA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTGAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502779.1_Dicranum_spurium_Dicranum_spurium_isolate_Dspu4_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and ------------------------------------------------------TAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCA-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KT580697.1_Dicranum_muehlenbeckii_Dicranum_muehlenbeckii_voucher_05.VII.2003__N.Dudareva__#593__IRK__tRNA-Leu__trnL__gene_and_trnL-trnF_intergenic_spa ----------------------------------------------------------AG NA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >DQ485165.1_Holomitrium_perichaetiale_Holomitrium_perichaetiale_voucher_Klazenga_5656__MEL_2099634__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_i ------------------------------------------------------------ ---CTTACTAAATGCTTGCTTTCAG-ATTCA-GGGAAACTTTGGTTGAAAAA---GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATCTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAAATGGCCCAAATAAAAAA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCC---- ------------------------ >AF435345.1_Schliephackea_meteorioides_Schliephackea_meteorioides_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__ --------------------------------------------------------ATAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCNAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ACTTA-CATG------TTAATTCTAGTAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACATAAACTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAAAAA--- -----AAG---------------------------------------------------- ------------------------ >KT580714.1_Dicranum_spadiceum_Dicranum_spadiceum_voucher_10.VII.2009__A.G.Bezgodov__#364__PPU__tRNA-Leu__trnL__gene_and_trnL-trnF_intergenic_spacer__c ------------------------------------------------------------ --------------CTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATATTTATTTAAATAAT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502770.1_Dicranum_polysetum_Dicranum_polysetum_isolate_Dpol_1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATCTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651072.1_Dicranum_laevidens_Dicranum_laevidens_isolate_Dic_1663_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequen -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651095.1_Dicranum_brevifolium_Dicranum_brevifolium_isolate_CH1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ796600.1_Dicranum_bardunovii_Dicranum_bardunovii_isolate_B74_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence_ -----------------------------------AAATAATTTG-AGCCTTAGTAAAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KT580680.1_Dicranum_caesium_Dicranum_caesium_voucher_08.VI.2011__A.Bezgodov__#60__PPU__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_sp -----------------------------------AAATGATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ACTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651106.1_Dicranum_leioneuron_Dicranum_leioneuron_isolate_SE_38_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KF424006.1_Dicranum_lorifolium_Dicranum_lorifolium_isolate_Ru_50_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KF423982.1_Dicranum_nipponense_Dicranum_nipponense_isolate_Ru_5B_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KF423931.1_Dicranum_howellii_Dicranum_howellii_isolate_DS_5_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__an -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAACTATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGTTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502756.1_Dicranum_crassifolium_Dicranum_crassifolium_isolate_PT_8_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KJ651090.1_Dicranum_angustum_Dicranum_angustum_isolate_SE_25_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__a -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAATTTTAAC--- ----ATTTATTTA------------ATCTAATTTCA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KT580685.1_Dicranum_dispersum_Dicranum_dispersum_voucher_10.VII.2004__Breen__#T001-3B__LE__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergeni -----------------------------------AAATAATTTG-AGCCTTAGTAGAAG AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KT580700.1_Dicranum_orientale_Dicranum_orientale_voucher_01.VIII.1995__T.Otnyukova__s.n.__MHA__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_inter -----------------------------------AAATAATTTG-AGCCTTAGTAGAAG AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATAGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KY296873.1_Dicranum_groenlandicum_Dicranum_groenlandicum_isolate_225_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_seq -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCA-------------AGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTG------- ------------------------ >AF135069.1_Dicranum_fragilifolium_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135075.1_Paraleucobryum_enerve_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAG--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135076.1_Paraleucobryum_longifolium_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAGTTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135071.1_Chorisodontium_wallisii_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------AATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAAT-AA--------------AAAAAATATT-----GTT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF129590.1_Holomitrium_arboreum_Holomitrium_arboreum_tRNA-Leu__trnL__gene__intron_sequence__chloroplast_gene_for_chloroplast_RNA. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435331.1_Holomitrium_cylindraceum_var._cucullatum_Holomitrium_cylindraceum_var._cucullatum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_t -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--ATATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCGAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >AF435329.1_Holomitrium_borbonicum_Holomitrium_borbonicum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--ATATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCGAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >AF435330.1_Holomitrium_calycinum_Holomitrium_calycinum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_s -----------------------------------AANTAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CCCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCYASCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >KF423992.1_Holomitrium_crispulum_Holomitrium_crispulum_isolate_PA29_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CCTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT-GA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAAAAA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >AF435328.1_Eucamptodontopsis_brittoniae_Eucamptodontopsis_brittoniae_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spac -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTCAAC--- ----ATTTATTTA------------ATTTAATTTTA-------TGAGT-TA--------- -------------ATATAAAT--A--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ACTTA-CATG------TTAATTCTAGTAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACCAGAATCTTTTTCT-------------------AT TGACATAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATAAA------ ------------------------------------------------------------ ------------------------ >KF423936.1_Dicranum_scoparium_Dicranum_scoparium_isolate_FR_1_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATAAA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KF424002.1_Dicranum_japonicum_Dicranum_japonicum_isolate_Djap_17_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATGAA--------------AAAAAATATT-----ATT---- ---TATTTGAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------AGTTTATGTTAAGATGGCCCAAATGAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >KM502768.1_Orthodicranum_montanum_Orthodicranum_montanum_isolate_Dmont2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_ -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAA-GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTGAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATAAA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AC--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAAAATTTTTTTCT-------------------AT TGACACAAGCTTCG-------------GGTTTATGTTAAGATGGCCCAAATAAAAGA--- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >DQ462598.1_Dicranoloma_robustum_Dicranoloma_robustum_voucher_Frey_&_Pfeiffer_98-T140_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATA-TTTG-AGCCTCAGTAGAAA AA-CTTACTANATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CCTAAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTGATTTTA-------TGAGT-TA--------- -------------ATACAAATAAA-------------AAAAA--TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-TGTG------TTGATTCTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435320.1_Dicranoloma_dicarpum_Dicranoloma_dicarpum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_seq -----------------------------------AAATAATTTG-AGCCTCAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---AT-------------CCTAAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTAATTTTA-------TGAGT-TA--------- -------------ATACAAATAAA-------------AAGAA--TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-TATG------TTAATTCTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTT-------------------AT TGACACAAGCTTCA-------------AGTTTGTGTTAAGATAGCCCAAATAGA------ ------------------------------------------------------------ ------------------------ >AF435317.1_Dicranoloma_billarderi_Dicranoloma_billardieri_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complet -----------------------------------AAATAATTTG-AGCCTCAGTAGAAA MA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---AT-------------CCTAAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTAATTTTA-------TGAGT-TA--------- -------------ATACAAATAAA-------------AAGAA--TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-TATG------TTAATTCTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTT-------------------AT TGACACAAGCTTCA-------------AGTTTGTGTTAAGATAGCCCAAATAGA------ ------------------------------------------------------------ ------------------------ >DQ462604.1_Dicranoloma_chilense_Dicranoloma_chilense_voucher_Frey_&_Schaumann_01-03_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATAATTTG-AGNNTCAGTAGAAA AA-CTTACTAAATGCTAGTTTCCAG-ATTCA-GGAAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTCAAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTCATTTTA-------TGAGT-TA--------- -------------ATATAAATAAA-------------AAAAA--TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >KP979024.1_Dicranoloma_blumii_Dicranoloma_blumii_voucher_MS.052_trnL-trnF_intergenic_spacer_region__partial_sequence__mitochondrial. -----------------------------------AAATAATTTG-AGCCTCAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---AT-------------CCTAAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTGATTTTA-------TGAGT-TA--------- -------------ATACAAATAAA-------------AAAAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-TGTG------TTGATTCTAGCAAC----AATT---------------------- ---CGAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTT-------------------AT TGACACAAGCTTCA-------------AGTTTGTGTTAAGATAGCCCAAATAGAAAAAAG CCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAAT---------------------- ------------------------ >AF435315.1_Dicnemon_semicryptum_Dicnemon_semicryptum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_seq -----------------------------------AANTAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAAAAA--GTATA -AGCAA----TCCCGAGCCAAATTTC---AT-------------CTCGAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAAATAAAT------AAAAAAAATCTT-----ATT---- ---TATTTAAATA------------AG--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTGGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTTT------------------AT TGACATAAGCTTCG-------------AATCTATGTTAAGATGGCCCAAATGGA------ ------------------------------------------------------------ ------------------------ >AF135067.1_Dicnemon_calycinum_Pulchrinodus_inflatus_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAAAAA--GTATA -AGCAA----TCCCGAGCCAAATTTC---AT-------------CTCGAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAAATAAAT------AAAAAAAATCTT-----ATT---- ---TATTTAAATA------------AG--------AAG---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435316.1_Dicnemon_spathoideum_Dicnemon_spathoideum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_seq -----------------------------------AAATAATTTG-GNCCTTNGTAGGGG AA-CTTACTAAATGCKAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCAAATTTC---AT-------------ATCGAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAR-----T------AAAAAAAGTATT-----ATT---- ---TATTTAAATA------------AG--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTTT------------------AT TGACATAAGCTTCA-------------AATCTATGTTAAGATGGCCCAAATACA------ ------------------------------------------------------------ ------------------------ >AF435340.1_Mesotus_celatus_Mesotus_celatus_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_sequence. -----------------------------------AAATA-TTTG-NNCCNTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTCGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTC---AT-------------CTCGAAAGGGA----- -------GATAGGTGCAGAGACTCGATKGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTCATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAA--------------AAAAAATATT-----ATT---- ---TATTTAAATA------------AG--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTWGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTTTTT------------------AT TGACATAAGCTTCG-------------AATTTATGTTAAGATGGCCCAANTAGA------ ------------------------------------------------------------ ------------------------ >AF478332.1_Dicnemon_seriatum_Dicnemon_seriatum_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ----------CGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCCTTAGTAGAGA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCAAATTTC---AT-------------ATCGAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAAT-----------AAAAAAAGTATT-----ATT---- ---TATTTAAATA------------AG--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------C------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135066.1_Eucamptodon_muelleri_Pulchrinodus_inflatus_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAGA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTC---GT-------------ATCGAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATCGAATTTTA-------TGAGT-TA--------- -------------ATATAAATAAA---------------AAAAATATT-----ATT---- ---TATTTAA-TA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGT---------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >HE993649.1_Dicranum_drummondii_Dicranum_drummondii_chloroplast_tRNA-Leu_gene_intron__isolate_BCB_1216_LE. ------------------------------GACTTAAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAGAAA--ATATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------CTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTGTCCTAACGCAAAAAGTTTTAAC--- ----ATTTAGTTA------------ATCTAATTTTA-------TGAGT-TG--------- -------------ATATAAATAAA---------------AAAAATATT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGG---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >KP979061.1_Dicranoloma_assimile_Dicranoloma_assimile_voucher_MS.025_trnL-trnF_intergenic_spacer_region__partial_sequence__mitochondrial. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTATTTG------------ATTTAATTTTG-------GGAGT-TG--------- -------------ATGTAGATGAA---------------GAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTTATTTTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAAAATTTTCTCT--------------------AT TGACATAAGCTTCG-------------AGTTTATGTTGGGATGGTCCGAATGGAAGAATA AAAAAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAAT-------------- ------------------------ >KP979055.1_Dicranoloma_havilandii_Dicranoloma_havilandii_voucher_MS.042_trnL-trnF_intergenic_spacer_region__partial_sequence__mitochondrial. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTATTTG------------ATTTAATTTTG-------GGAGT-TG--------- -------------ATGTAGATGAA---------------GAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTGATTTTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAAAATTTTCTCT--------------------AT TGACATAAGCTTCG-------------AGTTTATGTTGGGATGGTCCGAATGGAAGAATA GAAAAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAAT-------------- ------------------------ >DQ462607.1_Dicranoloma_menziesii_Dicranoloma_menziesii_voucher_Frey_&_Pfeiffer_98-T39_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTG------------ATTTGATTTTA-------GGAGT-TA--------- -------------ATATAGATGAG---------------TAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AGGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAAGAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >DQ462606.1_Dicranoloma_plurisetum_Dicranoloma_plurisetum_voucher_Frey_&_Pfeiffer_98-T99_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCTAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTA------------ATTTAATTTTA-------GGAGT-TG--------- -------------ATGTAGATGAA---------------GAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CNTG------TTGATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435313.1_Cryptodicranum_armittii_Cryptodicranum_armittii_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comple -----------------------------------AAATAATTTG-ANCCTTARTAKAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCCAACGCAAAAAGTTTCAAC--- ----GTCTACTTG------------ATTCAATTTTA-------GGAGT-TG--------- -------------ATGTAGATGAA---------------GAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTGATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTCT--------------------AT TGACATAAGCTTCG-------------AGTTTATGTTGGGATAGTCCGAATAGAAGAATA ------------------------------------------------------------ ------------------------ >KP979035.1_Dicranoloma_reflexum_Dicranoloma_reflexum_voucher_MS.012_trnL-trnF_intergenic_spacer_region__partial_sequence__mitochondrial. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCGAATTTT---GT-------------ATCAAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTACTTG------------ATTTAATTTTA-------GGAGT-TG--------- -------------ATGTAGATGAA---------------AAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTGATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAAAATTTTTTCT--------------------AT CGACATAAGCTTCG-------------AGTTTATGTTGGGATGGTCCAAATAGAAGAATA AAAAAAAGCCGGAATAGCTCAGSTGGTAGAGCAGAGGACTGAAAAT-------------- ------------------------ >KP979027.1_Dicranoloma_braunii_Dicranoloma_braunii_voucher_MS.019_trnL-trnF_intergenic_spacer_region__partial_sequence__mitochondrial. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---AT-------------ATCAAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAATTTTAAC--- ----GTCTACTTG------------ATTTAATTTTA-------GGAGT-TG--------- -------------ATATAGATGAA---------------GAAAATACT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTGATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAATTTTATCC--------------------AT TGACATAAGCTTCG-------------AGTTTATGTTGGGATAGTCCGAATAGAAGAATA GAAAAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAAT-------------- ------------------------ >AF435307.1_Braunfelsia_dicranoides_Braunfelsia_dicranoides_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comple -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATCTAATTG------------ATTTAATTTTA-------GGAGT-TA--------- -------------ATGTAGATGAA---------------GAAAATACT-----ATT---- ---TATTTGAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----GATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTCT--------------------AT CGACATAAGCTTCG-------------AGTTTATGTTGAGATAGCCCGAATAGAAGAATG ------------------------------------------------------------ ------------------------ >AF435324.1_Dicranoloma_diaphanoneurum_Dicranoloma_diaphanoneurum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__ -----------------------------------------------------AAATAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCCGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTANC--- ----ATCTACTTG------------ATTTAATTTTA-------GGAGT-TA--------- -------------ATATACATGAG---------------GAAAATACT-----ATT---- ---TATTTAAA-------------------------GGCGAGGATAAAGATAGAGTCCAG ATTTA-CATG------TTAATTCTAGCAAC----GATT---------------------- ---TAAATCGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAAAATTTTCTCT--------------------AT TGACATAAGCTTCG-------------AATTTATGTTGAGATGGCCNGAATAGAAGAATA ------------------------------------------------------------ ------------------------ >KF423978.1_Dicranoloma_cylindrothecium_Dicranoloma_cylindrothecium_isolate_Ru_2_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__c -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-CTTACTAAATGCTGGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCGAATTTT---GT-------------ATCGAGAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAATTTTAAC--- ----ATCTACTTG------------ATTTAATTTTA-------GGAGT-TA--------- -------------ATGTAGATGAA---------------GAAGATACT-----ATC---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAA ATTTA-CATG------TTAATTCTAGCAAC----GATT---------------------- ---TAAATTGTAGTAAGAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTAGAATTTTTTCT--------------------AT TGACATAAGCTTCG-------------GGTTTATGTTGAGATAGCCCGAATAGGAGAATA GAAAAAAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC------------- ------------------------ >AF435347.1_Sclerodontium_pallidum_Sclerodontium_pallidum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTTAAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTGAATTTTA-------TAAGT-TA--------- -------------ATGTAAATAAA-------------AAAAAAATATT-----ATT---- ---TTATTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAG ATTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAAATTT-------------------------- -AACATAAGTTTTC-------------AGTTTATGTTAAGATAGCCCAAATGAAC----- ------------------------------------------------------------ ------------------------ >AF435346.1_Sclerodontium_clavinerve_Sclerodontium_clavinerve_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comp --------------------------------------------------TTAATAGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTTAAAATAA----- ---------TAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTGAATTTTA-------TAAGTATA--------- -------------ATGTAAATAAA-------------AAAAAAATATT-----ATT---- ---TTATTAAATA------------AT--------ANGCGAGGATAAAGATAGAGTCCAR ATTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAAATTT-------------------------- -AACATAAGTTTTC-------------AGTTTATGTTAAGATGCCCCAAATGAAC----- ------------------------------------------------------------ ------------------------ >AF435338.1_Leucoloma_sprengelianum_Leucoloma_sprengelianum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__comple -------------------------------------------------------AGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTTAAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTGAATTTTA-------TAAGT-TA--------- -------------ATGTAAATAAA-------------AAAAAA-TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAG ATTTA-CATG------TTAATTTTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAAATTT-------------------------- -AACATAAGTTTTC-------------AGTTTATGTTAAGATAGCCCAAATGAAC----- ------------------------------------------------------------ ------------------------ >AF435339.1_Leucoloma_zeyheri_Leucoloma_zeyheri_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTTTAAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTGAATTTTA-------TAAGT-TA--------- -------------ATGTAAATAAA-------------AAAAAA-TATT-----ATT---- ---TATTTAAATA------------AT--------AAGCGAGGATAAAGATAGAGTCCAG ATTTA-CATG------TTAATTTTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATAAATTT-------------------------- -AACATAAGTTTTC-------------AGTTTATGTTAAGATAGCCCAAATGAAC----- ------------------------------------------------------------ ------------------------ >AF135072.1_Leucoloma_procerum_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCCTTAGTAGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTT-AAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTGAATTTTA-------TAAGT-TA--------- -------------ATATAAATAAA-------------ATAAAA-TGTT-----ATT---- ---TATTTAAATA------------AT--------GAGCGAGGATAAAGATAGAGTCCAG ATTTA-CCTG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF231253.1_Leucoloma_humbertii_Leucoloma_humbertii_tRNA-Leu_and_tRNA-Phe_genes__partial_sequence__chloroplast_genes_for_chloroplast_products. ------------------------------------------------CCTTAGTAGAAA AA-TTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT-------------TTT-AAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAC--- ----ATTTATTTA------------ATTAAATTTTC-------TAAGT-TA--------- -------------ATATAAATAAA-------------ATAAAA-TGTT-----ATT---- ---TATTTAAATA------------AT--------GAGCGAGGATAAAGATAGAGTCCAG ATTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAACCTATGAATTT-------------------------- -GACATAAGTTTC----------------TTTATGTTAAGATGGCCCAAATGAACAAA-- -----AAGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCC--- ------------------------ >AF435326.1_Distichium_capillaceum_Distichium_capillaceum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--ATATA -AGCGA----TCCTGAGCCAAATTTT---ATTTT-------------GAAAGTAAGATAT -----AAGATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAACTTTTTAG--- ----ATTTATTTA------------ATTGAAATTG-------ATGAAT-AATATAAATAA A------------ATATAAATAAAATAAAAGTTT--AGTTAAAATTTT-----ATTTTTT TATTTTTTAAATAG------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATG---------------------------AATT TTTTTTTATTGACA-------------TAAGCTTTCAATTTATGTTAGGATAGTTCAAAT GCA--------------------------------------------------------- ------------------------ >AF435327.1_Distichium_inclinatum_Distichium_inclinatum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_s -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATTTTTTTAT---ATTTTAAAAGTAAGATAT -----AAGATAGGTGCAGAGACTCGATGGGAGCTATCCTAACGCAAAAACTTTTAAG--- ----ATTTATTTA------------ATTGAAATTT-------AGGAAT-TA--------- -------------ATATAAATAAAATAAAAGTTT--AGTTACAATTTT-----ATTGTTA AATTTTTTAAATAG------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTA-TTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATGCCCAAAACTAT----------------GAGT TTTTTTTATTGACA-------------TAAGCTTCCAGCTTATGTTAGGATAGTTCAAAC GCA--------------------------------------------------------- ------------------------ >KX446934.1_Timmiella_anomala_Timmiella_anomala_tRNA-Leu__trnL__gene_and_trnL-trnF_intergenic_spacer__partial_sequence__plastid. --------------------------------------------G-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATTTT-------------AAAAGTAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATGAAAATTT-------ATGAAT-TA--------- -------------ATAGAAATAAAATAAAAGTTT--AGTTAAAATTTT-----CTT---- ----TTTTAAATAG------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATCTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTAGTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAACC----------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478338.1_Timmiella_crassinervis_Timmiella_crassinervis_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. -----TCGCCTCGAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAGAAA AA-CTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTCAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---ATTTC-------------AAAAGTAA----- -------AATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATGAAAATTT-------ATAAAT-TA--------- -------------ATAGAAATAAAATAAAATTTT--CATTAAAACTCT-----CTT---- -----TTTAAATAG------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------C------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135090.1_Dicranella_palustris_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATCTT---AT------------TTTTA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAA--- ----TTTTATTTA------------ATTGAATTAT-------ATTAGT-TA--------- -------------ATGAAAATAAAAAAAAAAAATTAAACTAAAATGGT-----ACT---- ---TTTTTAAATAAAAATAA------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135091.1_Aongstroemia_longipes_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATCTT---AT------------TTTTA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAA--- ----TTTTATTTA------------ATTGAATTAT-------ATGAGT-TA--------- -------------ATGAAAATTAAAAAAAAAATTTTAACTAAAATGTT-----ATT---- ---TTTTTAAATAA------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >EU186546.1_Pleuridium_acuminatum_Pleuridium_acuminatum_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATATAT-------ATTAAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----AGTTATTTA------------ATTAAATTCTCTT--CTCTGAGT-TA--------- -------------ATGAAAATAGAAAAATTTA-----ACGAAATTTTT-----TT----- -------TACCTAA------------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135098.1_Pseudephemerum_nitidum_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATATAT-------TTTAAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----AGTTATTTA------------ATTAAATTCTCTT--CTCTGAGT-TA--------- -------------ATGAAAATAGAAAAATTTA-----ACGAAATTTTT-----TT----- -------TACCTAA------------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AM259348.1_Ditrichum_lineare_Ditrichum_lineare_chloroplast_tRNA-Leu_gene__partial___trnL-trnP_intergenic_spacer_IGS_and_tRNA-Phe_gene__partial___isola ---AATTTTCGAAAAATTGGAGACGCTGCGGACTTAAATAATTTG-AGCTTTAGTAAAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--ATATA -AGCTA----TCCTGAGCCAAATTTT---ATAT----------TTTAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAATTTTAAG--- ----AGTTATTTA------------ATTGAATTCT-------CTAAGT-TA--------- -------------ATGAAAATAAAAAAAAAAATT---ATGAATTTTTT-----TT----- -------TAACTAG------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTT-AGCCAC----AATT---------------------- ----AAATTGAGAAAAAGAAA----TCCGTTGGCTT--ATTACCGTGAGGGTTCA-GTCC CTCACCC----------CCAAATATAAATTTGTTTAGGGA----------------GAAC GGTAATGCGAGAGA-------------CCTACCGAAAAGCCGGATTGTCCTTGTACCCGA CC---------------------------------------------------------- ------------------------ >AF135099.1_Trichodon_cylindricus_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTACA -AGCTA----TCCTGAGCCAAATTTT---ATAT----------TTTAA-AAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAAACTTTAAG--- ----AGTTATTTA------------ATTAAATTCT-------CTAAAT-TA--------- -------------ATGAAAATAAAAAAATTTA-----ACGAATTTTTT-----TAA---- ---CTAGTAACTAG------------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135103.1_Fissidens_adianthoides_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTCAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAAAAAAGTTTGAAG--- ----ATTTATTGA------------ATCAAATTCT-------ATAAGT-TA--------- -------------ATGGAAATGAAAAAATTTA-----ATCAAATTTTT-----AT----- -------TAAATCA------------C--------GAGCGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TCAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135104.1_Fissidens_cristatus_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-ATTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTCAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAAAAAAGTTTGAAG--- ----ATTTATTGA------------ATCAAATTCT-------ATAAGT-TA--------- -------------ATGGAAATGAAAAAATTTA-----ATCAAATTTTT-----AT----- -------TAAATAA------------C--------GAGCGAGGATAAAGATAGAGTCCAG TTTTA-CATG------TCAATTTTAGCAAC----AATT---------------------- ---CAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135102.1_Fissidens_taxifolius_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAGAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTCAA-AAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAAAAAAGTTTTAAG--- ----ATTTATTGA------------ATTAAATTAT-------ATAAGT-TA--------- -------------ATGAAAATGAAAAAATTTA-----ATTAAATTTTT-----AT----- -------TAAATAA------------T--------AAACGAGGATAGAGATAGAGTCCAA TTTTA-CATG------TCAATTTTAGCAAC----AATT---------------------- ---TAATTTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135106.1_Fissidens_glauculus_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAACAATTTG-AGCTTTAGTAGAAA AA-TTTATTAAATGCTAGCTTTCAA-ATTCA-GGGAACCTTAAGTTGAAAAAA--ATATA -AGCAA----TCCTGAGCCAAATCTT---AT------------TTTTA-AAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGGAAAACGTTTTAAA--- ----ACTTATTTA------------ATTAGATTCT-------ATGAAT-TA--------- -------------ATAAAAATAAAAAAATTTA-----ATTAAAATTTT-----AT----- -------TAAATAA------------C--------AAGCAAGGATAAAGAGAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135107.1_Fissidens_fontanus_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAACAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATTTTA-------AAAAAATAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAAAAAAATTTTAAG--- ----ATTTATTTA------------ATTAA-------------------TA--------- -------------ATAAAAATAAAAAAATTTA-----ATTACAATTTT-----AT----- -------TGAATAA------------C--------AAGCGAGGATAAAGAGAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135105.1_Fissidens_bryoides_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAACAATTTG-AGCTTTAGTAGAAA AA-TTTACTAAATGTTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---ATTTTA-------AAAAAATAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAAAAAAGTTTTAAG--- ----ATTTATTTA------------ATTAA-------------------TA--------- -------------ATAAAAATAAAAAATTTTA-----ATTAGAAGTTT-----AT----- -------TGAATAA------------C--------AAGCGAGGATAAAGAGAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135088.1_Campylopodium_medium_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTC-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTTA----TAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATTGAATTGTATAAGTTATAAGT-TA--------- -------------ATGGAAATAAAAAAAAAAATT---ACTAAAATTTT------------ --TTTTTTTAATAA------------T--------AAGCGAGGATAAAGATAGAGTCCGA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF136637.1_Dicranella_flaccidula_Microdus_flaccidulus_tRNA-Leu__trnL__gene__partial_sequence__chloroplast_gene_for_chloroplast_product. --------------------------------------TAACTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTTA----TAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATTGAATTGTATAAGTTATAAGT-TA--------- -------------ATGGAAATAAAAAAAAAAATT---ACTAAAAATTT------------ --TTTTTTTNNNNN------------T--------AAGCGAGGATAAAGATAGAGTCCGA TTT--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435353.1_Trichodontium_falcatum_Trichodontium_falcatum_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete --------------------------------------------------TTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTTA----TAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATTGAATTGTATCAGTTATAAGT-TA--------- -------------ATGGAAATAAAAAAAAAAATTT--AGTAATTTTTT------------ --TTTTTTTAATAA------------T--------AAGCGAGGATAAAGATAGAGTCCGA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTATTAATCCTTTTTT----------------TTAT TGACATAAGTTTCC-------------AGTTTATGTTAAGATAGCCTAGGCAAC------ ------------------------------------------------------------ ------------------------ >AF129597.1_Dicranella_cerviculata_Dicranella_cerviculata_tRNA-Leu__trnL__gene__intron_sequence__chloroplast_gene_for_chloroplast_RNA. -----------------------------------AAATAATTTG-AGCCTTGGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GAATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTTAATAATGA----- -------GATAGGTGCAGAGACTCGATGGAGGCTATCCTAACGCAAAAAGTTTTAAG--- ----ACTCTTTTT------------ATGAAATTATAT-------AAGT-TA--------- -------------ATATAAATAAAAGAATT--TAT--TA-AATTTTTA------------ -ACTTTTTGAATAA------------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------CTAATTTTAGCAAC----AATT---------------------- ---CAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF135089.1_Dicranella_nitidula_Dicranum_bonjeanii_chloroplast_trnL_gene__intron_sequence. -----------------------------------AAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTCTA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTTAAAAATAA----- -------AATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGTTTTAAG--- ----ATTTATTTA------------ATTGAATTGTAT-------AAGT-TA--------- -------------ATAGAAATAAAAAAAAT--TTT--AGTAATTTTTA-----CT----- -ATTTTATTGATAA------------T--------AAGCGAGGATAAAGATAGAGTCCCA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF129596.1_Dicranella_heteromalla_Dicranella_heteromalla_tRNA-Leu__trnL__gene__intron_sequence__chloroplast_gene_for_chloroplast_RNA. -----------------------------------AAGTAATTTG-AGCCTTGGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GAATA -AGCAA----TCCTGAGCCAAATTTT---AT------------TTTCAATAATGA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAAGTTTTAAT--- ----ATTTTTTTA------------ATTAAATTATAA-------ATGT------------ ----------------GAAACAAAAAAAAA--TTT--AATAAATTTT------------- --TTATTT---TAA------------T--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF435352.1_Trematodon_longicollis_Trematodon_longicollis_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete -----------------------------------AAATAATTTG-AGCTTTAATAGAAA AA-CTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCAA----TCCTGAGCCAAATTTT---ATA-----------TTTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATTCTAACGCAAAAG-TGCTAAA--- ----AGCTATTTA------------ATTGAATTCTAT-------CAGT-TA--------- -------------ATAGAAATAAAAAAA----TTA--GTTAATTTTTT-----TTT---- AACTAATTAACTAA------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATTATGCATTTTTTTTT----------------TTAT TGACATAAGCTTCC-------------AATTTATGTTACGATAGCCTAATAAAA------ ------------------------------------------------------------ ------------------------ >AF435309.1_Bruchia_flexuosa_Bruchia_flexuosa_chloroplast_tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergenic_spacer__complete_sequence. -----------------------------------AAATAATTTG-AGCTTTAATAGAAA AA-CTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAA--GTATA -AGCGA----TCCTGAGCCAAATTTT---ATA-----------TTTTAAAAATGA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAA-TGCTAAA--- ----AATTATTTA------------ATTGAATTCTAT-------TAGT-TA--------- -------------ATAGAAATAAAAAAA----CTA--GTTAATTTTTT-----TT----- AACTAATTAACTAA------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTGGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATTATGCATTTTTTTTT----------------T-AT TGACATAAGCTTCC-------------AATTTATGTTAGGATAGCCTGATAAAA------ ------------------------------------------------------------ ------------------------ >LN828226.1_Schistostega_pennata_Schistostega_pennata_chloroplast_trnL_gene_intron__isolate_B895. -----------------------------------AAATAATTTG-AGCTTTAATAGAAA AAACTTATTAAATGTCAGCTTTCAG-ATTCA-GGGAAACTTAAGTTGAAAAAA--GTATA -AGTAA----TCCTGAGCCAAATCTT---AAA-----------TTTTTTAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATTCTAACGTAAAAAATTTTAAT--- ----ATTTATTTA------------ATTGAATTCTA-------------TA--------- -------------ATGAAAATAGGAAAAAT--TTA--ATTAAATTTTT-----TT----- -----ATTTAATAA------------C--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >EU186539.1_Physcomitrella_patens_Physcomitrella_patens_tRNA-Leu__trnL__gene__intron__chloroplast. --------------------------------AAAAAATAATTTG-AGCTTTAGTAAAAA AA-TTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAAA-TATA -AGCAA----TCCTGAGCCAAATCTT---TTTTT----------ATCTTAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCATAATTTTTTAAA--- ----AATTATATA------------ATTAATTTTAATTTTTTATCCAT-TA--------- -------------ATAAAAATTAATTTAA--------ACTAAATTGTT-----AGTT--- -TTTAATTAAATTA-----------AA--------AAGTGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >JN088960.1_Physcomitrium_immersum_Physcomitrium_immersum_voucher_Christy_8505-1__DUKE__tRNA-Leu__trnL__gene__partial_sequence__and_trnL-trnF_intergeni -------------------------------------------------------AAAAA AA-TTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAAAATATA -AGCAA----TCCTGAGCCAAATCTT---TTTTT----------ATCTTAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCATAATTTTTTAAA--- ----AATTATATA------------ATTAATTTTAATTTTTTATCCAT-TA--------- -------------ATAAAAATTAATTTAA--------ACTAAATTGTT-----AGTT--- -TTTAATTAAATTA-----------AA--------AAGTGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAGTTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTAAGTGACCGTGAGGGTTCAAGTCC CTCTTCC----------CCCAAAATTAATAAATAATAAAA----------------TTTT CGTATATTTCTAAA-------------AAAATCTTTTTTATTGACACAAACTTTTAATTT ATGTTAAAATCTCAACGTAAAAC------------------------------------- ------------------------ >EU186540.1_Physcomitrium_pyriforme_Physcomitrium_pyriforme_tRNA-Leu__trnL__gene__intron__chloroplast. --------------------------------AAAAAATAATTTG-AGCTTTAGTAAAAA AA-CTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAAAATATA -AGCAA----TCCTGAGCCAAATCTT---TTTT-----------ATCTTAAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCATAATTTTTTAAA--- ----AGTTATACA------------ATTAATTTT--TTTTTTATCCAT-TA--------- -------------ATAAAAATTAATTTAA--------ACTAAATTGTT-----AGTT--- -TTTAATTAAATTA-----------AA--------AAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >EU186538.1_Funaria_hygrometrica_Funaria_hygrometrica_tRNA-Leu__trnL__gene__intron__chloroplast. ---------------------------------AAAAATAATTTG-AGCTTTAATAAAAA AA-CTTATTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAG--TATA -AGCAA----TCCTGAGCCAAATCTT---TTAT-----------ATTTTTAATAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCATAATTTTTTAAA--- ----ATTTATAAA------------ATA-------------------------------- ------------------------------------------------------------ -TTTAATTAAATTA-----------AA--------AAGCGAGGGTAAAGAGAGAGTCCAA TTTTA-CATG------TTAAATTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAG---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478324.1_Encalypta_procera_Encalypta_procera_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ----------CGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAA--TATA -GGCAA----TCCTGAGCCAAATTTT---ATTTT-------------AAAAGTAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGTATAATATTTT-AT--- ----ATTTATTTA------------ATTTAATTTATT--------AAT-TGAAATTG--- -------------ATGAAACTAAC-------------CTTAAACTAAA-----ATTTT-- ACTATTTTGAATAT------------T--------AAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTATC----------CCCA--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478325.1_Encalypta_streptocarpa_Encalypta_streptocarpa_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ----------CGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAA--TATA -GGCAA----TCCTGAGCCAAATTTT---ATTTT-------------AAAAGTAA----- -------GATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGTATAATATTTT-AT--- ----ATTTATTTA------------ATTTAATTTATT--------AAT-TGAAATTG--- -------------ATGAAACTAAC-------------CTTAAACTAAA-----ATTTT-- ACTATTTTGAATAT------------T--------AAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCATGAGGGTTCAAGTCC CTCTATC----------CCCA--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF478326.1_Encalypta_pilifera_Encalypta_intermedia_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. ------------CATTCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAA-ATATA -AGCAA----TCCTGAGCCAAATTTT---ATTTT-------------AAAAGTAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAATGTATAATATTTTTAT--- ----ATTTATTTA------------ATTGAATTTATT--------AAT-TC--------- -------------ATGAAACTAAA-------------TTTAAACTGAA-----ATTTT-- ACTATTTTAAATAT------------T--------AAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTTATTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTAT------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AF023718.1_Bryobrittonia_longipes_Bryobrittonia_longipes_tRNA-Leu__trnL__gene__chloroplast_gene_for_chloroplast_RNA__partial_sequence. ------------CGATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCGAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAA--TATA -AGCAA----TCCTGAGCCAAATTTT---ATTTTT---------ATTAAAAATAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCATAATAGTTTAAT--- ----ATTTATTTA------------ATTAAGTTTATT--------AAT-TG--------- -------------ATAAAACTCAA-------------ATGAAACTAAA-----ATTTTTT AATATTTTGAATAT------------T--------AAGCAAGGATAAAGAGAGAGTCCAA TTTTA-CATG------TTAATGTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTTTACC----------CCCAAAAGTAGTAAAATTTTTG--------------------- ---------TATAT-------------TTAATAGCACGTATAAATGTACAAAATTATAAA CAAATAATTTTTATTGACATTAAT------------------------------------ ------------------------ >DQ397196.1_Encalypta_armata_Encalypta_armata_voucher_Goffinet_5613__CONN__tRNA-Leu__trnL__gene_and_trnL-trnF_intergenic_spacer__complete_sequence__chl ------------------------------------------------CTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTTGGTTGAAAAAAA-ATATA -AGCAA----TCCTGAGCCAAATTTT---CTTTT-------------AAAAGTAA----- -------GATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGTATAATATTTTTAT--- ----ATTTATTTA------------ATT------------------AT-TG--------- -------------ATGAAACTAAA-------------TTTAAACTGAA-----ATTTT-- ATTATTTTGAATAT------------T--------AAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAATTTTAACAAC----AATT---------------------- ---TAAATTGTAGTAGAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACTTTATTAGTTTTGTA----------------CATT TCTATTTGTTATAT-------------ATAATAGCATATACAAATGTACAAAATTATAAA CAAATATTTTTTATTGACATAAACTTTTAATTTATGTTAAAATAATTTGAACAAAAAA-- ------------------------ >HM148900.1_Scopelophila_ligulata_Scopelophila_ligulata_isolate_110_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_seque -----------------------------------------TTTG-AGCTTTAGTAGAAA AA-CTTACTAAATGCTAGCTTTCAG-ATTCA-GGGAAACTTAGGTTGAAAAAAT-ATAGA -AGCGA----TCCTGAGCCAAATTTA---TT------------------AAATAA----- -------AATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAACTGAATTAAA--- ----AATTATTTA------------ATTCAATTATT-------TCAGT------------ ----------------TAATTAAA-------------ATAAAAAAATT------------ ---TAATTAAAAATA----------ATT-----AAAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATG------TTAAGTTTAGCAAC----AATT---------------------- ---TAAATTGTAGTAAAAAGAAAA-TCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAATTTTTTATTGACATAAGT--------------TTCCA GTTTACGTTATTAT-------------AATCTGAACAAAAAAGCCGGAATAGCTCAGTTG GTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAATA----------------- ------------------------ >KT380359.1_Pachyneuropsis_miyagii_Pachyneuropsis_miyagii_voucher_Yamaguchi_12580__HIRO__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_s -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGAAAAGATTTAA---- -------------------------------------------GACTTCTTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATCTC-ATTAAATTTTTTTT--AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380322.1_Tortella_spitsbergensis_Tortella_sp._OW-2013a_voucher_Afonina_&_Tubanova_348__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_interg ------------------------------------------------------------ ------------------------------------------------------------ ------GCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAT TAAAAAATTCC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CT------CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380352.1_Chionoloma_angustatum_Chionoloma_angustatum_voucher_Crosby_15682__KRAM__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380378.1_Chionoloma_duriuscula_Chionoloma_duriuscula_voucher_Hedderson_16771__BOL__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spac -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------TACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------TTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380371.1_Chionoloma_crassicostatum_Chionoloma_crassicostatum_voucher_Muller_NC367__DR__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTCA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAA- AAAAAA-TCTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCA--------------------------- ------------------------ >KT380355.1_Chionoloma_perlongifolium_Chionoloma_perlongifolium_voucher_Allen_6362__L__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spa -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTCA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAA- AAAAAAATCTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAAA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380354.1_Chionoloma_richardsii_Chionoloma_richardsii_voucher_Eggers_&_Frahm_79.2737__KRAM__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_interge -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAA AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380380.1_Chionoloma_dubium_Chionoloma_dubium_voucher_Koponen_34350__S__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTAATTTAATAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380312.1_Chionoloma_leptocylindricum_Chionoloma_leptocylindricum_voucher_Soares_et_al._2004__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAAATTTTTGATTTAATAAAAG AAAAAAATGTC-ATTAAAATTCTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-ATGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380318.1_Chionoloma_tenuirostre_Chionoloma_tenuirostre_voucher_Pocs_&_Pocs_03153 -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GATTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTATTT-CTGATTTTTTT-AT TGACATAACTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- CAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380350.1_Chionoloma_recurvifolium_Chionoloma_recurvifolium_voucher_Long_22212__E__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_space -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAGGAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTATTT-TTGATTTTTTT-AT TGACATAACTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- CAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380375.1_Chionoloma_minus_Chionoloma_minus_voucher_Long_29105__BBSUK__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- -----AAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------TATTTATTT-------- ------------------AATG----------------AAATTGTTTGATTTAATAAA-- -------TGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTATTT-CTGATTTTTTT-AT TGACATAATTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- CAAAAAGCCGGAA-TAGCTCAGTTGGTAGAG----------------------------- ------------------------ >KT380349.1_Chionoloma_hibernicum_Chionoloma_hibernicum_voucher_Long_30538__E__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__com -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GATTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAA-- -------TGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTGTTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTATTT-CTGATTTTTTT-AT TGACATAATTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- CAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380367.1_Chionoloma_daldinianum_Chionoloma_daldinianum_voucher_Long_38149__E__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__c -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAA-------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAGTAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTATTT-CTGATTTTTTT-AT TGACATAACTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- CAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >AF231164.1_Chionoloma_schimperiana_Pseudosymblepharis_schimperiana_tRNA-Leu__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_tRN --------TCCGAAANCGGTAGACGCTACGGACTTAAAGAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAG AAAAAAATGTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAATAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCAC-- ------------------------ >KJ145019.1_Weissia_squarrosa_Weissia_squarrosa_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------------------------------------ ----------AATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KJ145018.1_Weissia_levieri_Weissia_levieri_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------------------------------------ ----------AATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAGATTTC-ATTAAAATTTTTT---AATTTATAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KJ145015.1_Weissia_longifolia_Weissia_longifolia_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------GACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAGATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KJ145013.1_Weissia_multicapsularis_Weissia_multicapsularis_haplotype_2_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------GACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAT GAAAAAATTTC-ATTAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KJ145016.1_Weissia_brachycarpa_Weissia_brachycarpa_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------GACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTCCATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KJ145012.1_Weissia_controversa_var._densifolia_Weissia_controversa_var._densifolia_trnL-trnF_intergenic_spacer__partial_sequence__chloroplast. ------------------------------GACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------G---------------- --------------------TGG---------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAG------------------------------------------- ------------------------ >KT380332.1_Weissia_condensa_Weissia_condensa_voucher_Cano_791__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGT---------------AAATTTTTTGATTTAATAAAAG AAAAAGATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGAGGTCAGAACAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380323.1_Trichostomum_brachydontium_Trichostomum_brachydontium_voucher_Cano_6569__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380324.1_Trichostomum_crispulum_Trichostomum_crispulum_voucher_Cano_6521__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAATTTTC-ATGAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTCATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380327.1_Tortella_alpicola_Tortella_alpicola_voucher_Cano_et_al._4284__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__com -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTGATTTAATAAAAG AAAAAATTTTC-ATGAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTCATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380334.1_Weissia_jamaicensis_Weissia_jamaicensis_voucher_Grande_et_al._5764__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_space -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTAATTTAATAAAAG AAAAA-TTTTC-ATGAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AATTTGTGTTAGGATAGCCTAGA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380346.1_Chionoloma_duidense_Chionoloma_duidense_voucher_Allen_23180__MO__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__compl -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AAT-----------------AAATTTTTTGATTTAATAAAAG AAAAAAACCTC-ATTAAAATGTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCAAAATAGTTAACAAAATATTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGTCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380320.1_Chionoloma_induratum_Chionoloma_induratum_voucher_Klazenga_1292__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__ -----------------------------------------TTTG-AGCTTTGATAA-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAC AAAAAAATCTC-ATTAAAATTTTTT---AATTTACCAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTG----------T TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380341.1_Chionoloma_schlimii_Chionoloma_schlimii_voucher_Soares_et_al._2255__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_space -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTCA------TATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGAAAAGATTTAATTAA -------------------------------------------GACTTATTT-------- ------------------AATG----------------AAAATTTTTGATTTAATAAAA- AAAAAAATCTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAAA-GGACTGAAAATCCTCGTGT----- ------------------------ >KF356269.1_Tortella_x_cuspidatissima_Tortella_sp._OW-2013b_voucher_SB_Engelmark_177966_tRNA-Leu__trnL__gene__partial_sequence__chloroplast. ------------------GTAGACGCTGCGGACTTAAATAATTTG-AGTTTTGATAG-AA AAATTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAT GAAAAAATTCC-ATTAAAATTTTTT---CATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGG--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >KF356272.1_Tortella_arctica_Tortella_arctica_voucher_MW_Fedosov_9.7.2004_tRNA-Leu__trnL__gene__partial_sequence__chloroplast. ------------------GTAGACGCTGCGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGG--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AY950427.1_Tortella_fragilis_Tortella_fragilis_voucher_BM_M._Ignatov_s.n._tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_seq ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTCATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCG-------- ------------------------ >AY950430.1_Tortella_inclinata_Tortella_inclinata_voucher_BM000824494_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----GAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA G----------------------- >AY950431.1_Tortella_nitida_Tortella_nitida_voucher_BM000824493_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_ ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA G----------------------- >AY950405.1_Pleurochaete_luteola_Pleurochaete_luteola_voucher_BM000824501_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_sequ ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA G----------------------- >AY950423.1_Tortella_densa_Tortella_densa_voucher_BM_E._Wiltshire_s.n._tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc ---------TCGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTT-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GQ428081.1_Tortella_tortuosa_Tortella_tortuosa_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__and_tRNA-Phe__t -------TTTCGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAAGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----TAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGATTTAATAAAAG AAAAAAATTTC-ATTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATAA-------------- >AY950424.1_Tortella_flavovirens_Tortella_flavovirens_voucher_BM_H._Streimann_54900_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__com ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTGCTTTAATAAAAG AAAAAAATTTC-ATTAAACTTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAATAAA------ GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA G----------------------- >KT380335.1_Molendoa_sendtneriana_Molendoa_sendtneriana_voucher_Cano_&_Jim_nez_5333__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_ -----------------------------------------TTTG-AGCTTTAATAG-AA AAACTTATTAAATGCTAGCTTTCAA-ATTCAGGG-AATCTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAA-------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACACAAAAAGATTTAA---- --------------------------------------------AGTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAAA AAAAAAATTTC-ACTAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ACT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- NAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >KT380307.1_Streptocalypta_lorentziana_Streptocalypta_lorentziana_voucher_Cano_et_al._4181__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_inte -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTAT--TTACATTT---------AAAAAA------- ----GAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTGATTTAA -------------------------------------------AAGTTATTT-------- ------------------AATG----------------AAATTTTTTAATTTAATAAAAG AAAAAAACCTC-ATTAAAATTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAT----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------ATTAGTT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >AY950402.1_Eucladium_verticillatum_Eucladium_verticillatum_voucher_BM000824490_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complet ----------------------------------------------------GATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAAA-GT--- --ATAAGCCATCCTGAGCCAAATTTTC------CATTT---------AAAAAAA------ ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAAATTTAA---- -------------------------------------------AA--------------- ------------------------------------------------------------ -------------------TTTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTAATTTTT---AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATATCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTT-CAAATA-------------- >HM148902.1_Gymnostomum_lanceolatum_Gymnostomum_lanceolatum_isolate_81_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_se -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTATTAAATGCTAGCTTTCAA-ATTCAGGG-AACCTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTG------TATTT---------AAAAAAA------ ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGTAAAAAGATTTAA---- -------------------------------------------AAGTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAAT--AAA AAAAAAATTTC-ACTAAAATTTTTT---CATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ACT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTT-CAAATA-------------- >HM148901.1_Anoectangium_aestivum_Anoectangium_aestivum_isolate_85_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequen -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTATTAAATGCTAGCTTTCAA-ATTCAGGG-AACCTTAAGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------AAGTTATTT-------- ------------------AATA----------------AATTTTTTGATTT------ACT AAAAAAATTTC-ACTAAAACTTTTT---CATTTATAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ACT-TGAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTAACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAAT--------- AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTT-CAAATA-------------- >KX355925.1_Gymnostomiella_vernicosa_var._acuminata_Gymnostomiella_vernicosa_var._acuminata_voucher_HBNU_Liu_Yongying_05433_tRNA-Leu__trnL__gene__parti --------TTCGAAATTCGGTAGCGCTACGGACTTAAATAATTTG-AGCTTTAGTAA-AA AAACTTACTAAATGCTAGCTTTCAA-ATTCAGGG-GATCTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------TATTT---------AAAAAAA------ ----CAAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAAAATTTAA---- -------------------------------------------GATTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAACG AAAAAAATTTC-ACTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAGATA------------CTTAATT-CTTATTTTTTT-AT TGACATAACTTTAC-------------AGTTTGTGTTAGGATAGCCTAAAG--------- AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCCAAG GTTTCAAATAAAA----------- >DQ337177.1_Ephemerum_sessile_Ephemerum_sessile_voucher_MUB_11417_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequenc -------------------TAGACGCTGCGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAATTATTT-------- ------------------AATG----------------AAATTTTTTC------------ -----------------------------ATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAT----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-TTGATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAG-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCAC-- ------------------------ >AF229912.1_Ephemerum_spinulosum_Ephemerum_spinulosum_tRNA-Leu__trnL__and_tRNA-Phe__trnF__genes__partial_sequence__chloroplast_genes_for_chloroplast_pr ------------AAAATCGGAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAACGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATG----------------AAATTTTTTTCTTTTATTAAAT TAAAAAACTTT-ATTAAAAATTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAT----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACA------------CTTAGTT-TTGATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAG-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTC--------- ------------------------ >GU252055.1_Ephemerum_serratum_Ephemerum_serratum_isolate_757_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__a ------------------------------GACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAACGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATG----------------AAATTTTTTTCTTTTATTAAAT TAAAAAACTTT-ATTAAAAATTTTT---AATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAT----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAACA------------CTTAGTT-TTGATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAG-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTTCAAATA-------------- >KT380329.1_Tortella_humilis_Tortella_humilis_voucher_Cano_4966_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence_ -----------------------------------------TTTG-AGCTTTGATAG-AA AAACTTATTAAATGTTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------GATTT---------AAAAAAAA----- ----CAAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGCAAAAATATTTAA---- -------------------------------------------AAGTTATTT-------- ------------------AATG----------------AAATTTTTTG------------ -----------------------------ATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTACTT-CTTATTTTTTTTAT TGACATAAGTTTAT-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCTGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGT----- ------------------------ >AY950414.1_Pleurochaete_squarrosa_Pleurochaete_squarrosa_voucher_BM000824509_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_ --------------ATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTA------------ -----------------------------ATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCA------------------- >AY950437.1_Pottiopsis_caespitosa_Trichostomum_pallidisetum_voucher_BM000824496_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complet ---------TCGAAATCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAG-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--GT--- --ATAAGCGATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAAATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATGG---------------AAATTTTTTG------------ -----------------------------ATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CTGATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTGTGTTAGGATAGCCTAAA---------- GAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >AF478327.1_Streblotrichum_convolutum_Barbula_convoluta_trnL_gene__partial_sequence__chloroplast_gene_for_chloroplast_product. -------------ATTCGGTAGACGCTACGGACTTAAATAATTTG-AGCTTTGATAA-AA AAACTTATTAAATGCTAGCTTTCAG-ATTCAGGG-AAACTTAGGTTGAAAAAA--AT--- --ATAAGCGATCCTGAGCCAAATTTTA------GATTT---------AAAAAAA------ ----CAAAATAGGTGCAGAGACTCAACGGAAGCTATCCTAACGCAAAAATATTTAA---- -------------------------------------------GAGTTATTT-------- ------------------AATA----------------AAATTTTTTG------------ -----------------------------ATTTACAAGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAT----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTATC----------CCCA--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >AY950403.1_Hyophila_involuta_Hyophila_involuta_voucher_BM000824492_tRNA-Leu__trnL___partial_sequence__trnL-trnF_intergenic_spacer__complete_sequence__ ------------------GTAGACGCTACGGACTTAAATAATTTG-AGCTTTAGTAG-AA AAATTTACTGAATGCTAGCTTTCAG-ATTCAGGG-AACCTTAGGTTGAAAAAA--GT--- --ATAAGCAATCCTGAGCCAAATTTTC------CATTT---------AAAAAAAA----- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCAAAAAGATTTAA---- -------------------------------------------GATTTATTT-------- ------------------AATG----------------AAATTTTTTGATTTAATAAAA- -AAAAAATTTTCACTAAAATTTTTT---AATTTACAAGCAAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CTGATTTTTTT-AT TGACATAACTTTAC-------------AGTTTATGTTAGGATAATCTAAA---------- AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA G----------------------- >GU953724.1_Bryoerythrophyllum_campylocarpum_Bryoerythrophyllum_campylocarpum_voucher_Cano_3178_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_inter -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-ACTA- --TAAAGCAATCCTGAGCCAAATTTTA------CATTG---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAGTTTTC-------- ------------------ATTA----------------AAAATTTTGGATTTTT------ -------------------TTGATTT--AATTTACACGCGAGGATAAAGATATAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGGA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953716.1_Bryoerythrophyllum_inaequalifolium_Bryoerythrophyllum_inaequalifolium_voucher_Cano_2292_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_i -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAAT- --ATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAATTTTC-------- ------------------ATTA----------------AAAATTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAACCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953731.1_Bryoerythrophyllum_recurvirostrum_Bryoerythrophyllum_recurvirostrum_voucher_Cano_4675_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_int -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-ACA-- ---TAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAGAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGGAAATTAAATCA- -------------------------------------------AAAATTTT--------- ------------------------------------------------------------ --------------------TGATTT--AATTTCCATGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACTGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATG------------CTTAATT-CGAATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953720.1_Erythrophyllopsis_andina_Erythrophyllopsis_andina_voucher_Cano_&_Jimenez_3976_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_ -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATNCAGGG-AATCTTAGGTTGAAAAAAA-AATA- ---TAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----AAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAAATT--------- ---------------------A----------------AAAATTTTTAATTTTT------ -------------------TTGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAAAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953734.1_Cinclidotus_riparius_Cinclidotus_riparius_voucher_Cano_4785_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_spacer__complete_s -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAAAA -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGTGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------AATA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAG TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CGAATTTTTTTTAT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AT------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >EU186544.1_Cinclidotus_nigricans_Cinclidotus_nigricans_tRNA-Leu__trnL__gene__intron__chloroplast. -----------------------------------AAATAATTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAAAA -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGTGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------AATA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAG TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-G--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ >KR677401.1_Pseudocrossidium_carinatum_Pseudocrossidium_carinatum_voucher_Buck_60874__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCCAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAG-- -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------AATG----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAG TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTGAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953735.1_Dialytrichia_mucronata_Dialytrichia_mucronata_voucher_Guerra_et_al._s.n._tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_space -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAA-- -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGTGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------AATA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAG TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAAAA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AT------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >KR677419.1_Pseudocrossidium_santiagensis_Pseudocrossidium_santiagensis_voucher_Cano_372__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_interg -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCCAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAAG- -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCC- -------------------------------------------AAAAAATTT-------- ------------------CATG----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAG TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >GU953726.1_Erythrophyllopsis_zanderi_Erythrophyllopsis_sp._JFJ-2010_voucher_Fuentes_&_Aldana_6619_tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_in -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AA--- -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAATTTTT-------- ------------------AATG----------------AAAATTTT-------------- --------------------TGATTT--AATTTATACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AG------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >KR677406.1_Pseudocrossidium_crinitum_Pseudocrossidium_crinitum_voucher_Bester_4980__NY__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_intergenic_s -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATTTTAGGTTGAAAAAAA-AA--- -CATAAGCAATCCTGAGCCAAATTTTC------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------ATTA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AT------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >KR677413.1_Pseudocrossidium_denticulatum_Pseudocrossidium_denticulatum_voucher_Cano_453__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_interg -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AA--- -CATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAATTTT-------- ------------------AATA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-TATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AT------ AAAAAAGCCGGAA-TAGCTCATTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >KR677414.1_Pseudocrossidium_excavatum_Pseudocrossidium_excavatum_voucher_Cano_&_Guerra_2045__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_in -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AA--- -TATAAGTAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAATTTC-------- ------------------ATTA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAT-------------AGTTTATGTTAGGATAGCCTAAC--AT------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA--------------- >KR677389.1_Pseudocrossidium_apiculatum_Pseudocrossidium_apiculatum_voucher_Cano_et_al._3398__MUB__tRNA-Leu__trnL__gene__partial_sequence__trnL-trnF_in -----------------------------------------TTTG-AGCTTTAGTAG-AA AAACTTACTAAATGCTAGCTTTCAG-ATTCAGGG-AATCTTAGGTTGAAAAAAA-AAAA- -TATAAGCAATCCTGAGCCAAATTTTA------CATTT---------AAAAAA------- ----CAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCA- -------------------------------------------AAAAATTTC-------- ------------------ATTA----------------AAATTTTT-------------- --------------------TGATTT--AATTTACACGCGAGGATAAAGATAGAGTCCAA TTTTA-CATGTTA-----ATT-TTAACAAC----AATT---------------------- ---TAAATTGTAGTAAAAA-GAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCC CTCTACC----------CCCAAAATA------------CTTAATT-CGAATTTTTTT-AT TGACATAAGTTTAC-------------AGTTTATGTTAGGATAGCCTAA---AT------ AAAAAAGCCGGAA-TAGCTCAGTTGGTAGAGCAGA-GGACTGAAAATCCTCGTGTCACCA GTTCAAATA---------------