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IUPAC Sequence Alphabets:
The nucleic acid codes supported are: |
The amino acid codes supported are: |
|||
|---|---|---|---|---|
| Nucleic Acid Code | Meaning | Amino Acid Code | Meaning | |
|
A
|
Adenosine |
A
|
Alanine | |
|
C
|
Cytidine |
B
|
Aspartic acid or Asparagine | |
|
G
|
Guanine |
C
|
Cysteine | |
|
T
|
Thymidine |
D
|
Aspartic acid | |
|
U
|
Uracil |
E
|
Glutamic acid | |
|
R
|
G A (puRine) |
F
|
Phenylalanine | |
|
Y
|
T C (pYrimidine) |
G
|
Glycine | |
|
K
|
G T (Ketone) |
H
|
Histidine | |
|
M
|
A C (aMino group) |
I
|
Isoleucine | |
|
S
|
G C (Strong interaction) |
K
|
Lysine | |
|
W
|
A T (Weak interaction) |
L
|
Leucine | |
|
B
|
G T C (not A) (B comes after A) |
M
|
Methionine | |
|
D
|
G A T (not C) (D comes after C) |
N
|
Asparagine | |
|
H
|
A C T (not G) (H comes after G) |
P
|
Proline | |
|
V
|
G C A (not T, not U) (V comes after U) |
Q
|
Glutamine | |
|
N
|
A G C T (aNy) |
R
|
Arginine | |
|
X
|
masked |
S
|
Serine | |
|
-
|
gap of indeterminate length |
T
|
Threonine | |
|
U
|
Selenocysteine | |||
|
V
|
Valine | |||
|
W
|
Tryptophan | |||
|
Y
|
Tyrosine | |||
|
Z
|
Glutamic acid or Glutamine | |||
|
X
|
any | |||
|
*
|
translation stop | |||
|
-
|
gap of indeterminate length | |||
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